Genographic Project

Very cool. This project sets out to map human migration throughout history with genetic markers. Now to convince the missus I should spend $200 to get paternal and maternal mapping done....

Evolution for Dummies

From a Scientific American list of 15 common attacks on evolution. I'll spare the more mundane or ridiculous items (semantics about 'theory', no one has seen evolution, etc).

6. If humans descended from monkeys, why are there still monkeys?

This surprisingly common argument reflects several levels of ignorance about evolution. The first mistake is that evolution does not teach that humans descended from monkeys; it states that both have a common ancestor.

The deeper error is that this objection is tantamount to asking, "If children descended from adults, why are there still adults?" New species evolve by splintering off from established ones, when populations of organisms become isolated from the main branch of their family and acquire sufficient differences to remain forever distinct. The parent species may survive indefinitely thereafter, or it may become extinct.

8. Mathematically, it is inconceivable that anything as complex as a protein, let alone a living cell or a human, could spring up by chance.

This explanation is good, but leaves out a key element--the vast amount of time over which natural selection has in which to work. Similarly to the vastness of space, the vastness of time is something we all have trouble wrapping our minds around. We can look at the numbers in scientific notiation, even read examples and comparisons, but at the end of the day time and space are too vast for us to really take their measure in a way we can internalize.

Chance plays a part in evolution (for example, in the random mutations that can give rise to new traits), but evolution does not depend on chance to create organisms, proteins or other entities. Quite the opposite: natural selection, the principal known mechanism of evolution, harnesses nonrandom change by preserving "desirable" (adaptive) features and eliminating "undesirable" (nonadaptive) ones. As long as the forces of selection stay constant, natural selection can push evolution in one direction and produce sophisticated structures in surprisingly short times. As an analogy, consider the 13-letter sequence "TOBEORNOTTOBE." Those hypothetical million monkeys, each pecking out one phrase a second, could take as long as 78,800 years to find it among the 26¹³ sequences of that length. But in the 1980s Richard Hardison of Glendale College wrote a computer program that generated phrases randomly while preserving the positions of individual letters that happened to be correctly placed (in effect, selecting for phrases more like Hamlet's). On average, the program re-created the phrase in just 336 iterations, less than 90 seconds. Even more amazing, it could reconstruct Shakespeare's entire play in just four and a half days.

11. Natural selection might explain microevolution, but it cannot explain the origin of new species and higher orders of life.

Evolutionary biologists have written extensively about how natural selection could produce new species. For instance, in the model called allopatry, developed by Ernst Mayr of Harvard University, if a population of organisms were isolated from the rest of its species by geographical boundaries, it might be subjected to different selective pressures. Changes would accumulate in the isolated population. If those changes became so significant that the splinter group could not or routinely would not breed with the original stock, then the splinter group would be reproductively isolated and on its way toward becoming a new species. Natural selection is the best studied of the evolutionary mechanisms, but biologists are open to other possibilities as well. Biologists are constantly assessing the potential of unusual genetic mechanisms for causing speciation or for producing complex features in organisms. Lynn Margulis of the University of Massachusetts at Amherst and others have persuasively argued that some cellular organelles, such as the energy-generating mitochondria, evolved through the symbiotic merger of ancient organisms. Thus, science welcomes the possibility of evolution resulting from forces beyond natural selection. Yet those forces must be natural; they cannot be attributed to the actions of mysterious creative intelligences whose existence, in scientific terms, is unproved.

14. Living things have fantastically intricate features--at the anatomical, cellular and molecular levels--that could not function if they were any less complex or sophisticated. The only prudent conclusion is that they are the products of intelligent design, not evolution.

This "argument from design" is the backbone of most recent attacks on evolution, but it is also one of the oldest. In 1802 theologian William Paley wrote that if one finds a pocket watch in a field, the most reasonable conclusion is that someone dropped it, not that natural forces created it there. By analogy, Paley argued, the complex structures of living things must be the handiwork of direct, divine invention. Darwin wrote On the Origin of Species as an answer to Paley: he explained how natural forces of selection, acting on inherited features, could gradually shape the evolution of ornate organic structures.

Generations of creationists have tried to counter Darwin by citing the example of the eye as a structure that could not have evolved. The eye's ability to provide vision depends on the perfect arrangement of its parts, these critics say. Natural selection could thus never favor the transitional forms needed during the eye's evolution--what good is half an eye? Anticipating this criticism, Darwin suggested that even "incomplete" eyes might confer benefits (such as helping creatures orient toward light) and thereby survive for further evolutionary refinement. Biology has vindicated Darwin: researchers have identified primitive eyes and light-sensing organs throughout the animal kingdom and have even tracked the evolutionary history of eyes through comparative genetics. (It now appears that in various families of organisms, eyes have evolved independently.)

Today's intelligent-design advocates are more sophisticated than their predecessors, but their arguments and goals are not fundamentally different. They criticize evolution by trying to demonstrate that it could not account for life as we know it and then insist that the only tenable alternative is that life was designed by an unidentified intelligence.

A Queer Exhibit

Birds and bees may be gay - museum exhibition

By Alister Doyle, Environment Correspondent Thu Oct 12, 6:52 AM ET

OSLO (Reuters) - The birds and the bees may be gay, according to the world's first museum exhibition about homosexuality among animals.

With documentation of gay or lesbian behaviour among giraffes, penguins, parrots, beetles, whales and dozens of other creatures, the Oslo Natural History Museum concludes human homosexuality cannot be viewed as "unnatural".

"We may have opinions on a lot of things, but one thing is clear -- homosexuality is found throughout the animal kingdom, it is not against nature," an exhibit statement said.

Geir Soeli, the project leader of the exhibition entitled "Against Nature", told Reuters: "Homosexuality has been observed for more than 1,500 animal species, and is well documented for 500 of them."

The museum said the exhibition, opening on Thursday despite condemnation from some Christians, was the first in the world on the subject. Soeli said a Dutch zoo had once organised tours to view homosexual couples among the animals.

"The sexual urge is strong in all animals. ... It's a part of life, it's fun to have sex," Soeli said of the reasons for homosexuality or bisexuality among animals.

One exhibit shows two stuffed female swans on a nest -- birds sometimes raise young in homosexual couples, either after a female has forsaken a male mate or donated an egg to a pair of males.

One photograph shows two giant erect penises flailing above the water as two male right whales rub together. Another shows a male giraffe mounting another for sex, another describes homosexuality among beetles.

One radical Christian said organisers of the exhibition -- partly funded by the Norwegian government -- should "burn in hell", Soeli said. Laws describing homosexuality as a "crime against nature" are still on the statutes in some countries.

Greek philosopher Aristotle noted apparent homosexual behaviour among hyenas 2,300 years ago but evidence of animal homosexuality has often been ignored by researchers, perhaps because of distaste, lack of interest or fear or ridicule.

Bonobos, a type of chimpanzee, are among extremes in having sex with either males or females, apparently as part of social bonding. "Bonobos are bisexuals, all of them," Soeli said.

Still, it is unclear why homosexuality survives since it seems a genetic dead-end.

Among theories, males can sometimes win greater acceptance in a pack by having homosexual contact. That in turn can help their chances of later mating with females, he said.

And a study of homosexual men in Italy suggested that their mothers and sisters had more offspring. "The same genes that give homosexuality in men could give higher fertility among women," he said.

Something's alive near the Dead Sea

Unique Underground Ecosystem Revealed by Hebrew University Researchers Uncovers Eight Previously Unknown Species

Example of one of the unique crustacean species found in the cave (photo by Sasson Tiram)

Discovery of eight previously unknown, ancient animal species within “a new and unique underground ecosystem” in Israel was revealed today by Hebrew University of Jerusalem researchers. In a press conference on the Mt. Scopus campus of the Hebrew University, the researchers said the discovery came about when a small opening was found , leading to a cave extending to a depth of 100 meters beneath the surface of a quarry in the vicinity of Ramle, between Jerusalem and Tel Aviv. The quarry is operated by cement manufacturer Nesher Industries. The cave, which has been dubbed the Ayalon Cave, is “unique in the world,” said Prof. Amos Frumkin of the Hebrew University Department of Geography. This is due mainly to its isolation from the outside world, since the cave’s surface is situated under a layer of chalk that is impenetrable to water. The cave, with its branches, extends over some 2½ kilometers, making it Israel’s second largest limestone cave. It is to remain closed to the public to permit further scientific research. The invertebrate animals found in the cave – four seawater and freshwater crustaceans and four terrestial species – are related to but different from other, similar life forms known to scientists. The species have been sent to biological experts in both Israel and abroad for further analysis and dating. It is estimated that these species are millions of years old. Also found in the cave were bacteria that serve as the basic food source in the ecosystem. “The eight species found thus far are only the beginning” of what promises to be “a fantastic biodiversity,” said Dr. Hanan Dimentman of the Hebrew University Alexander Silberman Institute of Life Sciences, another of the researchers involved in the project. He said that he expects further exploration to reveal several other unique life forms. The animals found there were all discovered live, except for a blind species of scorpion, although Dr. Dimentman is certain that live scorpions will be discovered in further explorations and also probably an animal or animals which feed on the scorpions. The underground cave includes an underground lake, in which the crustaceans were found. The lake is part of the Yarkon-Taninim aquifer, one of Israel’s two aquifers, yet is different in temperature and chemical composition from the main waters of the aquifer. The lake’s temperature and salinity indicates that its source is deep underground. Among the interesting features of the discoveries thus far in the cave is that two of the crustaceans are seawater species and two others are of a types found in fresh or brackish water. This can provide insights into events occurring millions of years ago regarding the history of ancient bodies of water in the region. In addition to Prof. Frumkin, who heads the unit for cave research in the Department of Geography, and Dr. Dimentman, others involved in the project are Prof. Dov Por and Prof. Aharon Oren of the Institute of Life Sciences, graduate student Israel Naaman, and several others. The Israel Water Commission has assisted in the research, as has Nesher Industries. Yoel Feldschue, director-general of Nesher Industries, said today that Nesher will preserve the ecological ecosystem which has been revealed in the center of its quarry in order to avoid any damage to the important findings there. He added in that regard that he is hopeful that the planning authorities will enable the company to operate in alternate areas in order to help preserve the scientific site.